refactor(commands): separate commands and its core into two folders (#32)

- I think it would be better if one for commands only, one for the spec
handling core logic so people won't be confused by the core logic inside
the commands folder (cleaner I guess)
- Regen docs

commands/python/ruff.go

@@ -1,17 +1,17 @@
 package python
 
 import (
-	"github.com/versenilvis/iris/commands/core"
+	"github.com/versenilvis/iris/spec"
 )
 
 func init() {
-	core.Register(&core.Spec{
+	spec.Register(&spec.Spec{
 		Name:        "ruff",
 		Description: "Enable verbose logging",
-		Subcommands: []core.Subcommand{
+		Subcommands: []spec.Subcommand{
 			{Name: "graph", Description: "Generate a map of Python file dependencies or dependents"},
 		},
-		Options: []core.Option{
+		Options: []spec.Option{
 			{Name: "-v", Description: "Enable verbose logging"},
 			{Name: "-q", Description: "Print diagnostics, but nothing else"},
 			{Name: "-s", Description: "Path to the `pyproject.toml` or `ruff.toml` file to use for configuration"},